Ξ±-L-rhamnosidase (gene St-Rha) from Spirochaeta thermophila DSM 6192

Enzyme Description

Extremophile
Yes thermophilic organism
EC Number

Sequence

Length: 895 amino acids
MVHVYDVMCEGQRFPLGLSTARPRFSWRIGAAEGVGDLFQEAFQIQVALDEGFTSPVWDSGMVHEGRSQWVDYGGPELSPCTRYYVRVRVKPIGGELSPWSDATWFETGLPEWTAPFVSPEPVERVGRSSRPRYVRREFSIDRSVAGARLYATALGLYELSINGRRVGDSFFTPGWTSYRRLLYQTYDVTDYLRPGRNVVAGIVANGWYRGELTWFLERNLYGREIALSVDLRWKEEGGEGRLVTDSTWRSSDGPLVYAELYHGEVYDSRLEVPGWDLPGFDDGEWEECRVLEISGRAVEAQEAPPVRIHERLAPVRIITTPRGEKVLDFGQNLTGWVRFRVRGRSGDRVRLRHAEILDKEGNFYTDNLRKARNIVEYVLKGEGEEEFSPRFSFQGFRYVCVDEWPGEINPSDFTAEVLHSDMEPLLEFRCSHEPLNRLHHNIQWSWKGNSLAIPTDCPQRDERLGWTGDAAMFVGTATYLSDARSFLLQWLVDMTLDQRRDGAVPFVVPDVLSLLEQQDPNFREPPFGSAGWGDAITICPWTLYRRYGDRRILERLYPAMQRWVEYMRAQAREGLVWERGFHFGDWVALDAEEGSYVGLTPLPLIATAFYALSTEILARTAGVLGLEEDERRYKDLHKRIAAAWCREFFTGEGRLRVETQTGYTLGLAFGLVPESAREEAAARLADLVREKGHLTTGFLGTPFLLRVLSDHGYTDLAYTLLLRDEYPSWLYEVKAGATTIWEHWDGIKPDGTMWSPQMNSFNHYAYGAVGEWMYAVMGGIRAEDGGPGFSSFSLEPLPGGDVRECSVHYRSPYGLIASSWTIEDGRMHWVFEVPPNTKATVRLWGVESRSVEGAAKLGLQDRIEDGGPCAAAQVGSGRYELICPVPVRRFRSMT
Chen-Mu Luo et al. (2024) β€” Efficient biosynthesis of prunin in methanol cosolvent system by an organic solvent-tolerant Ξ±-L-rhamnosidase from Spirochaeta thermophila
Enzyme and Microbial Technology  Β· doi:10.1016/j.enzmictec.2024.110410 β†—  Β· Activity - Classical Activity - Michaelis-Menten Stability - Incubation Activity + Stability - Conversion
46 measurements
Database ID
Sequence Annotation
Explicit - Provided
Protein Source
Recombinant, host bacterium Escherichia coli BL21 (DE3)

Experimental Data (46 measurements)

46 measurements β€” page 1 of 3
Property Assay Solvent Solvent Volume Aqueous Reference Measured Value Units Solution pH Temperature Substrate(s) Product(s) Cofactor(s) Shaking Comments
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Benzene 20% 100.0 86.1 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Benzene 10% 100.0 102.0 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Acetonitrile 30% 100.0 17.9 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Acetonitrile 20% 100.0 40.2 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Acetonitrile 10% 100.0 81.1 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Dimethyl Sulfoxide (DMSO) 30% 100.0 6.8 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Dimethyl Sulfoxide (DMSO) 20% 100.0 29.8 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Dimethyl Sulfoxide (DMSO) 10% 100.0 66.7 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Ethanol 30% 100.0 2.8 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Ethanol 20% 100.0 44.7 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Ethanol 10% 100.0 80.6 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Methanol 20% 100.0 109.8 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Methanol 10% 100.0 123.2 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Cyclohexane 30% 100.0 95.7 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Cyclohexane 20% 100.0 96.7 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Cyclohexane 10% 100.0 103.5 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Petroleum Ether 30% 100.0 71.7 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Petroleum Ether 20% 100.0 88.6 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Petroleum Ether 10% 100.0 103.3 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
Activity - Classical Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent Benzene 30% 100.0 89.1 % 50 mM phosphate buffer 6 65Β°C 1 mM Naringin L-Rhamnose , Prunin β€” β€” Classical aqueous control (in %)
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Visualization : Activity β€” Classical

One bar per measurement. Colour = solvent, shade = solvent volume.

Visualization : Activity β€” Michaelis-Menten

One bar per measurement. Colour = solvent, shade = solvent volume.

Visualization : Stability β€” Incubation

One bar per measurement. Colour = solvent, shade = solvent volume.

Visualization : Activity + Stability β€” Conversion

One bar per measurement. Colour = solvent, shade = solvent volume.

Structure

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