Ξ±-L-rhamnosidase (gene St-Rha) from Spirochaeta thermophila DSM 6192
Enzyme Description
Extremophile
Yes
thermophilic organism
EC Number
Sequence
MVHVYDVMCEGQRFPLGLSTARPRFSWRIGAAEGVGDLFQEAFQIQVALDEGFTSPVWDSGMVHEGRSQWVDYGGPELSPCTRYYVRVRVKPIGGELSPWSDATWFETGLPEWTAPFVSPEPVERVGRSSRPRYVRREFSIDRSVAGARLYATALGLYELSINGRRVGDSFFTPGWTSYRRLLYQTYDVTDYLRPGRNVVAGIVANGWYRGELTWFLERNLYGREIALSVDLRWKEEGGEGRLVTDSTWRSSDGPLVYAELYHGEVYDSRLEVPGWDLPGFDDGEWEECRVLEISGRAVEAQEAPPVRIHERLAPVRIITTPRGEKVLDFGQNLTGWVRFRVRGRSGDRVRLRHAEILDKEGNFYTDNLRKARNIVEYVLKGEGEEEFSPRFSFQGFRYVCVDEWPGEINPSDFTAEVLHSDMEPLLEFRCSHEPLNRLHHNIQWSWKGNSLAIPTDCPQRDERLGWTGDAAMFVGTATYLSDARSFLLQWLVDMTLDQRRDGAVPFVVPDVLSLLEQQDPNFREPPFGSAGWGDAITICPWTLYRRYGDRRILERLYPAMQRWVEYMRAQAREGLVWERGFHFGDWVALDAEEGSYVGLTPLPLIATAFYALSTEILARTAGVLGLEEDERRYKDLHKRIAAAWCREFFTGEGRLRVETQTGYTLGLAFGLVPESAREEAAARLADLVREKGHLTTGFLGTPFLLRVLSDHGYTDLAYTLLLRDEYPSWLYEVKAGATTIWEHWDGIKPDGTMWSPQMNSFNHYAYGAVGEWMYAVMGGIRAEDGGPGFSSFSLEPLPGGDVRECSVHYRSPYGLIASSWTIEDGRMHWVFEVPPNTKATVRLWGVESRSVEGAAKLGLQDRIEDGGPCAAAQVGSGRYELICPVPVRRFRSMT
Chen-Mu Luo et al. (2024)
β Efficient biosynthesis of prunin in methanol cosolvent system by an organic solvent-tolerant Ξ±-L-rhamnosidase from Spirochaeta thermophila
Enzyme and Microbial Technology
Β· doi:10.1016/j.enzmictec.2024.110410 β
Β· Activity - Classical Activity - Michaelis-Menten Stability - Incubation Activity + Stability - Conversion
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Database ID
NCBI: ADN01795.1 β
Sequence Annotation
Explicit - Provided
Protein Source
Recombinant, host bacterium Escherichia coli BL21 (DE3)
Experimental Data (46 measurements)
46 measurements β page 1 of 3
| Property | Assay | Solvent | Solvent Volume | Aqueous Reference | Measured Value | Units | Solution | pH | Temperature | Substrate(s) | Product(s) | Cofactor(s) | Shaking | Comments |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Benzene | 20% | 100.0 | 86.1 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Benzene | 10% | 100.0 | 102.0 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Acetonitrile | 30% | 100.0 | 17.9 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Acetonitrile | 20% | 100.0 | 40.2 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Acetonitrile | 10% | 100.0 | 81.1 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Dimethyl Sulfoxide (DMSO) | 30% | 100.0 | 6.8 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Dimethyl Sulfoxide (DMSO) | 20% | 100.0 | 29.8 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Dimethyl Sulfoxide (DMSO) | 10% | 100.0 | 66.7 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Ethanol | 30% | 100.0 | 2.8 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Ethanol | 20% | 100.0 | 44.7 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Ethanol | 10% | 100.0 | 80.6 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Methanol | 20% | 100.0 | 109.8 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Methanol | 10% | 100.0 | 123.2 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Cyclohexane | 30% | 100.0 | 95.7 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Cyclohexane | 20% | 100.0 | 96.7 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Cyclohexane | 10% | 100.0 | 103.5 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Petroleum Ether | 30% | 100.0 | 71.7 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Petroleum Ether | 20% | 100.0 | 88.6 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Petroleum Ether | 10% | 100.0 | 103.3 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
| Activity - Classical | Activity measured by absorbance spectrophotometry (DNS assay, 540 nm) in the presence of organic solvent | Benzene | 30% | 100.0 | 89.1 | % | 50 mM phosphate buffer | 6 | 65Β°C | 1 mM Naringin | L-Rhamnose , Prunin | β | β | Classical aqueous control (in %) |
Visualization : Activity β Classical
One bar per measurement. Colour = solvent, shade = solvent volume.
Visualization : Activity β Michaelis-Menten
One bar per measurement. Colour = solvent, shade = solvent volume.
Visualization : Stability β Incubation
One bar per measurement. Colour = solvent, shade = solvent volume.
Visualization : Activity + Stability β Conversion
One bar per measurement. Colour = solvent, shade = solvent volume.