Endo-Ξ²-N-acetylglucosaminidase from Arthrobacter protophormiae

Enzyme Description

Extremophile
No
EC Number

Sequence

Length: 645 amino acids
MRKAFLVGLVCTACVLLHDDPVAASTYNGPLSSHWFPEELAQWEPDSDPDAPFNRSHVPLEPGRVANRVNANADKDAHLVSLSALNRHTSGVPSQGAPVFYENTFSYWHYTDLMVYWAGSAGEGIIVPPSADVIDASHRNGVPILGNVFFPPTVYGGQLEWLEQMLEQEEDGSFPLADKLLEVADYYGFDGWFINQETEGADEGTAEAMQAFLVYLQEQKPEGMHIMWYDSMIDTGAIAWQNHLTDRNKMYLQNGSTRVADSMFLNFWWRDQRQSNELAQALGRSPYDLYAGVDVEARGTSTPVQWEGLFPEGEKAHTSLGLYRPDWAFQSSETMEAFYEKELQFWVGSTGNPAETDGQSNWPGMAHWFPAKSTATSVPFVTHFNTGSGAQFSAEGKTVSEQEWNNRSLQDVLPTWRWIQHGGDLEATFSWEEAFEGGSSLQWHGSLAEGEHAQIELYQTELPISEGTSLTWTFKSEHGNDLNVGFRLDGEEDFRYVEGEQRESINGWTQWTLPLDAFAGQTITGLAFAAEGNETGLAEFYIGQLAVGADSEKPAAPNVNVRQYDPDPSGIQLVWEKQSNVHHYRVYKETKHGKELIGTSAGDRIYLEGLVEESKQNDVRLHIEALSETFVPSDARMIDIKSGSF
J Q Fan et al. (1995) β€” Enhanced transglycosylation activity of Arthrobacter protophormiae endo-beta-N-acetylglucosaminidase in media containing organic solvents
Journal of Biological Chemistry  Β· doi:10.1074/jbc.270.30.17723 β†—  Β· Activity - Classical Activity + Stability - Conversion Specificity - Reaction Specificity
24 measurements
Database ID
UniProt: Q9ZB22 β†—
Sequence Annotation
Inferred - from protein name
Protein Source
Purified, bacterium Arthrobacter protophormiae

Experimental Data (24 measurements)

24 measurements β€” page 1 of 2
Property Assay Solvent Solvent Volume Aqueous Reference Measured Value Units Solution pH Temperature Substrate(s) Product(s) Cofactor(s) Shaking Comments
Activity - Classical Activity measured by mass spectrometry in the presence of organic solvent Acetonitrile 30% 100.0 6.9 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre Man9​GlcNAc2​-Asn GlcNAc–Asn , Man9​GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Activity - Classical Activity measured by mass spectrometry in the presence of organic solvent 1,4-Dioxane 30% 100.0 79.3 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre Man9​GlcNAc2​-Asn GlcNAc–Asn , Man9​GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Activity - Classical Activity measured by mass spectrometry in the presence of organic solvent Dimethylformamide (DMF) 30% 100.0 64.2 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre Man9​GlcNAc2​-Asn GlcNAc–Asn , Man9​GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Activity - Classical Activity measured by mass spectrometry in the presence of organic solvent Dimethyl Sulfoxide (DMSO) 30% 100.0 99.0 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre Man9​GlcNAc2​-Asn GlcNAc–Asn , Man9​GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Activity - Classical Activity measured by mass spectrometry in the presence of organic solvent Ethanol 30% 100.0 55.0 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre Man9​GlcNAc2​-Asn GlcNAc–Asn , Man9​GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Activity - Classical Activity measured by mass spectrometry in the presence of organic solvent Methanol 30% 100.0 32.5 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre Man9​GlcNAc2​-Asn GlcNAc–Asn , Man9​GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Activity - Classical Activity measured by mass spectrometry in the presence of organic solvent Tetrahydrofuran (THF) 30% 100.0 9.2 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre Man9​GlcNAc2​-Asn GlcNAc–Asn , Man9​GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Activity - Classical Activity measured by mass spectrometry in the presence of organic solvent Acetone 30% 100.0 100.0 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre Man9​GlcNAc2​-Asn GlcNAc–Asn , Man9​GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Activity + Stability - Conversion Conversion measured by HPLC after incubation (15 minutes at 37Β°C) in the presence of organic solvent Dimethyl Sulfoxide (DMSO) 30% 98.0 75.2 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine GlcNAc–Asn , Man9​GlcNAc , Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)/Both hydrolysis and transglycosylation reactions measured
Activity + Stability - Conversion Conversion measured by HPLC after incubation (15 minutes at 37Β°C) in the presence of organic solvent Tetrahydrofuran (THF) 30% 98.0 1.4 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine GlcNAc–Asn , Man9​GlcNAc , Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)/Both hydrolysis and transglycosylation reactions measured
Activity + Stability - Conversion Conversion measured by HPLC after incubation (15 minutes at 37Β°C) in the presence of organic solvent Methanol 30% 98.0 97.5 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine GlcNAc–Asn , Man9​GlcNAc , Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)/Both hydrolysis and transglycosylation reactions measured
Activity + Stability - Conversion Conversion measured by HPLC after incubation (15 minutes at 37Β°C) in the presence of organic solvent Ethanol 30% 98.0 52.9 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine GlcNAc–Asn , Man9​GlcNAc , Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)/Both hydrolysis and transglycosylation reactions measured
Activity + Stability - Conversion Conversion measured by HPLC after incubation (15 minutes at 37Β°C) in the presence of organic solvent Dimethylformamide (DMF) 30% 98.0 28.3 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine GlcNAc–Asn , Man9​GlcNAc , Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)/Both hydrolysis and transglycosylation reactions measured
Activity + Stability - Conversion Conversion measured by HPLC after incubation (15 minutes at 37Β°C) in the presence of organic solvent 1,4-Dioxane 30% 98.0 14.4 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine GlcNAc–Asn , Man9​GlcNAc , Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)/Both hydrolysis and transglycosylation reactions measured
Activity + Stability - Conversion Conversion measured by HPLC after incubation (15 minutes at 37Β°C) in the presence of organic solvent Acetonitrile 30% 98.0 0.02 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine GlcNAc–Asn , Man9​GlcNAc , Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)/Both hydrolysis and transglycosylation reactions measured
Activity + Stability - Conversion Conversion measured by HPLC after incubation (15 minutes at 37Β°C) in the presence of organic solvent Acetone 30% 98.0 91.9 % 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine GlcNAc–Asn , Man9​GlcNAc , Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in %) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)/Both hydrolysis and transglycosylation reactions measured
Specificity - Reaction Specificity Percentage of transglycosylation product to digested substrate after incubation (15 minutes at 37Β°C) in the presence of organic solvent, measured by HPLC Acetone 30% 32.5 99.1 % transglycosylation product 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in % transglycosylation product) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Specificity - Reaction Specificity Percentage of transglycosylation product to digested substrate after incubation (15 minutes at 37Β°C) in the presence of organic solvent, measured by HPLC Acetonitrile 30% 32.5 100.0 % transglycosylation product 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in % transglycosylation product) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Specificity - Reaction Specificity Percentage of transglycosylation product to digested substrate after incubation (15 minutes at 37Β°C) in the presence of organic solvent, measured by HPLC 1,4-Dioxane 30% 32.5 97.0 % transglycosylation product 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in % transglycosylation product) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
Specificity - Reaction Specificity Percentage of transglycosylation product to digested substrate after incubation (15 minutes at 37Β°C) in the presence of organic solvent, measured by HPLC Dimethylformamide (DMF) 30% 32.5 100.0 % transglycosylation product 25 mM ammonium acetate buffer 6 37Β°C 3 nmol/20microlitre of Man9GlcNAc2Asn, N-Acetyl-D-Glucosamine Man9​GlcNAc–GlcNAc β€” β€” Classical aqueous control (in % transglycosylation product) | Same organism as Glutamicibacter protophormiae (Brevibacterium protophormiae)
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Visualization : Activity β€” Classical

One bar per measurement. Colour = solvent, shade = solvent volume.

Visualization : Activity + Stability β€” Conversion

One bar per measurement. Colour = solvent, shade = solvent volume.

Visualization : Specificity β€” Reaction Specificity

One bar per measurement. Colour = solvent, shade = solvent volume.

Structure

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