L-Haloacid Dehalogenase (gene PinHAD) from Psychromonas ingrahamii

Enzyme Description

Extremophile
Yes "psychorphilic" organism
EC Number

Sequence

Length: 225 amino acids
MSVILAFDVYGTLINTHGIVTILEKWLGKNAQAFSQTWRDKQLEYSFRRGLMQNYQSFAVCTRHALDYTCNFYRVSLSKEQKQALMDGYKTLPAFDDAANALAQLKGAGFKLYAFSNGTKEAVEELLTGAGIRAFFDGIVSCDDLKSFKPNPAVYCHFLRESGAKHNQAWLISSNPFDVIGAISTGMLSAWVQRSQDAIFDPWDVDPTAIITSLKELKGVLPKPD
Halina R. Novak et al. (2013) β€” Characterisation of an l-Haloacid Dehalogenase from the Marine Psychrophile Psychromonas ingrahamii with Potential Industrial Application
Marine Biotechnology  Β· doi:10.1007/s10126-013-9522-3 β†—  Β· Stability - Incubation Stability - Tm
34 measurements
Database ID
β€”
Sequence Annotation
Explicit - Provided
Protein Source
Recombinant, host bacterium Escherichia coli ArcticExpressTM (DE3)

Experimental Data (34 measurements)

34 measurements β€” page 1 of 2
Property Assay Solvent Solvent Volume Aqueous Reference Measured Value Units Solution pH Temperature Substrate(s) Product(s) Cofactor(s) Shaking Comments
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Dimethyl Sulfoxide (DMSO) 50% 100.0 11.1 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Methanol 30% 100.0 95.1 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Methanol 40% 100.0 94.6 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Methanol 50% 100.0 20.5 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Methanol 60% 100.0 6.5 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Dimethyl Sulfoxide (DMSO) 10% 100.0 94.6 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Dimethyl Sulfoxide (DMSO) 20% 100.0 92.1 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Dimethyl Sulfoxide (DMSO) 30% 100.0 88.4 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Dimethyl Sulfoxide (DMSO) 40% 100.0 74.2 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Methanol 20% 100.0 95.1 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Dimethyl Sulfoxide (DMSO) 60% 100.0 6.5 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Acetonitrile 10% 100.0 64.6 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Acetonitrile 20% 100.0 51.6 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Acetonitrile 30% 100.0 37.0 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Acetonitrile 40% 100.0 31.4 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Acetonitrile 50% 100.0 13.2 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Acetonitrile 60% 100.0 6.7 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Methanol 10% 100.0 93.5 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Ethanol 60% 100.0 7.0 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
Stability - Incubation Activity after incubation (1 hour at room temperature), measured by absorbance spectrophotometry (decrease in phenol red absorbance measurement, 540 nm) in aqueous phase Ethanol 50% 100.0 12.3 % Incubation: ?, Assay: 1 mM HEPES buffer, 1 mM EDTA, 20 mM sodium sulphate, 20 ΞΌg/ml phenol red Incubation: ?, Assay: 8.2 Incubation: Room temperature, Assay: 25Β°C 10 mM Chloroacetic acid Chloride ion , Glycolic Acid β€” β€” Non-incubated control (in %), activity measured in aqueous phase | Uncertainty about control, clear about assay in water
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Visualization : Stability β€” Tm

One bar per measurement. Colour = solvent, shade = solvent volume.

Visualization : Stability β€” Incubation

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Structure

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