Ξ²-galactosidase from Sulfolobus solfataricus

Enzyme Description

Extremophile
Yes thermoacidophilic organism
EC Number

Sequence

Length: 489 amino acids
MYSFPNSFRFGWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGPGYWGNYKTFHDNAQKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDLKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEGLYDVLTKYWNRYHLYMYVTENGIADDADYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFGLLKVDYNTKRLYWRPSALVYREIATNGAITDEIEHLNSVPPVKPLRH
Susan M. Hancock et al. (2005) β€” Developing Promiscuous Glycosidases for Glycoside Synthesis: Residues W433 and E432 in Sulfolobus solfataricus Ξ²-Glycosidase are Important Glucoside- and Galactoside-Specificity Determinants
ChemBioChem  Β· doi:10.1002/cbic.200400341 β†—  Β· Activity - Michaelis-Menten
51 measurements
Database ID
UniProt: P22498 β†—
Sequence Annotation
Explicit - Provided PDB Accession Number
Protein Source
Recombinant, host bacterium Escherichia coli BL21 (DE3)

Experimental Data (51 measurements)

51 measurements β€” page 1 of 3
Mutation Property Assay Solvent Solvent Volume Aqueous ReferenceWT Reference Measured Value Units Solution pH Temperature Substrate(s) Product(s) Cofactor(s) Shaking Comments
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetonitrile 20% 12736.0 β€” 18380.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten Km (mM) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Dimethyl Sulfoxide (DMSO) 30% 0.56 β€” 6.33 mM 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in mM)
WT Activity - Michaelis-Menten Km (mM) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent 1,4-Dioxane 30% 0.56 β€” 5.12 mM 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in mM)
WT Activity - Michaelis-Menten Km (mM) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent 2-Butanone 30% 0.56 β€” 2.2 mM 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in mM)
WT Activity - Michaelis-Menten Km (mM) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent 2-Butanone 5% 0.56 β€” 0.49 mM 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in mM)
WT Activity - Michaelis-Menten Km (mM) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetone 30% 0.56 β€” 1.84 mM 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in mM)
WT Activity - Michaelis-Menten Km (mM) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetone 5% 0.56 β€” 0.73 mM 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in mM)
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetonitrile 50% 12736.0 β€” 4873.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetonitrile 40% 12736.0 β€” 7021.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetonitrile 30% 12736.0 β€” 6061.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat (/s) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetonitrile 40% 7.2 β€” 19.73 1/s 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/s)
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetonitrile 10% 12736.0 β€” 19872.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetonitrile 5% 12736.0 β€” 23039.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Dimethylformamide (DMF) 30% 12736.0 β€” 1579.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Dimethyl Sulfoxide (DMSO) 30% 12736.0 β€” 2857.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent 1,4-Dioxane 30% 12736.0 β€” 1724.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent 2-Butanone 30% 12736.0 β€” 8220.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent 2-Butanone 5% 12736.0 β€” 28331.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetone 30% 12736.0 β€” 7973.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
WT Activity - Michaelis-Menten kcat/Km (1/(s*M)) measured by absorbance spectrophotometry (p-nitrophenol absorbance measurement, 405 nm) in the presence of organic solvent Acetone 5% 12736.0 β€” 17545.0 1/(s*M) 50 mM phosphate buffer 6.5 45Β°C p-nitrophenyl galactose D-Galactose , p-Nitrophenol β€” β€” Classical aqueous control (in 1/(s*M))
β€Ή Prev
1 2 3

Mutations in this dataset (3)

WT E432C W433C

Visualization : Activity β€” Michaelis-Menten

One bar per measurement. Colour = solvent, shade = solvent volume. β€” β€” β€” Reference value. Hover for details.

Mutation Effect β€” Michaelis-Menten

Mutation impact on kinetic parameters in the presence of organic solvent: comparison of wild-type and mutant values in identical conditions.

Structure

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